《中医方剂大辞典》中消渴病方剂“核心药物-作用靶点”关联性挖掘研究Study on relevance mining of "core drug action target" in Dictionary of Traditional Chinese Medicine Prescriptions
王波;周荣荣;唐仕欢;
WANG Bo;ZHOU Rong-rong;TANG Shi-huan;Wangjing Hospital, China Academy of Chinese Medical Sciences;School of Basic Medical Sciences, Shanxi University of Traditional Chinese Medicine;Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences;
摘要(Abstract):
基于《中医方剂大辞典》数据库,应用中医传承辅助平台挖掘消渴病方高频药物,通过关联规则和聚类分析挖掘其核心药物及其组合;基于整合药理学平台挖掘药物-疾病关系,构建"药物-化合物-靶点"网络并富集分析关键靶点的基因功能、代谢通路,对其"核心药物-作用靶点"关联性进行挖掘分析,从而探讨其防治消渴病的分子机制。收集、整理并挖掘《中医方剂大辞典》中341首消渴病方剂,药物频次统计甘草最常用,其次是麦冬、茯苓、人参、黄连等,药性偏于寒、温、平,药味偏于辛、苦、酸,归肺、胃、脾等经;其中17味药关联密切,人参、麦冬、茯苓、甘草为核心中药,麦冬是黄连、天花粉与核心中药联系的关键节点;应用整合药理学平台分析获得"人参、茯苓、甘草、麦冬"核心药物组合防治消渴病的10个关键核心靶点,包括已知疾病靶点(PLCD1,PIK3R1,ENPP1)、潜在药物靶点(GNB1,ADCY1,AKT1,RAC1,PRKAA1,RHOA)、共同靶点(GCK)。与"麦冬、黄连、天花粉"药物组合存在7个相同靶点(PLCD1,PIK3R1,ENPP1,ADCY1,AKT1,PRKAA1,GCK)。这些靶点基因功能主要定位于胞质液、质膜等,参与三磷酸腺苷结合、蛋白质结合、血小板活化等;主要参与内分泌系统、信号转导、趋化因子信号通路、癌症通路等代谢通路,推测这些基因与消渴病(糖尿病)有潜在的关联关系。该研究应用中医传承辅助平台与整合药理学平台分析消渴病方剂的组方规律,挖掘获得其"核心药物-作用靶点"的关联性,为中医方剂防治消渴病的方剂筛选及其开发提供了依据和借鉴。
Based on the database of "Dictionary of Traditional Chinese Medicine Prescriptions", high-frequency herbs of Xiaoke disease is mined by traditional Chinese medicine inheritance support system, and core herbs and combinations are discovered through association rules and cluster analysis. On this basis, based on the integrative pharmacology of traditional Chinese medicine to explore the herb-disease relationship, the "herb-compound-target" network is constructed and enriched for the analysis of key target gene functions, metabolic pathways, and their "core herb-target interactions". In order to explore the molecular mechanism of its prevention and treatment of diabetes, 341 diabetes prescriptions are collected, organized, and tapped in the Dictionary of Traditional Chinese Medicine Prescriptions. Herb frequency statistics show that Licorice was the most commonly used, followed by Ophiopogonis Radix, Poria, Ginseng Radix et Rhizoma, Coptidis Rhizoma, etc., the medicinal properties are mostly cold, warm and ping, and the medicinal taste tends to be pungent, bitter, and sour, and they were attributed to lung meridian, stomach meridian, spleen meridian, etc. Among them, the 17 herbs were closely related. Ginseng Radix et Rhizoma, Ophiopogonis Radix, Poria and Glycyrrhizae Radix et Rhizoma were the core Chinese herbs. Ophiopogonis Radix was the key node of Coptidis Rhizoma, Trichosanthis Radix and core Chinese medicine, and Ophiopogonis Radix was the key node for the connection between Coptidis Rhizoma and Trichosanthis Radix and the core Chinese herbs. Using integrated pharmacology platform analysis, 10 crucial core targets for the prevention and treatment of diabetes were obtained, including the known disease targets(PLCD1, PIK3 R1, ENPP1), and potential herb targets(GNB1, ADCY1, AKT1, RAC1, PRKAA1, RHOA), common target(GCK). There were seven similar targets in the 10 crucial core targets predicted with the combination of "Ophiopogonis Radix, Coptidis Rhizoma and Trichosanthis Radix", including PLCD1, PIK3 R1, ENPP1, ADCY1, AKT1, PRKAA1, GCK. These genes were mainly located in the cytosol, plasma membrane, etc., involved in adenosine triphosphate binding, protein binding, platelet activation, etc., mainly involved in the endocrine system, signal transduction, chemokine signaling pathway, cancer pathway, and other metabolic pathways, and it is speculated that these genes were potentially associated with diabetes. In this study, Traditional Chinese Medicine Inheritance Support System and Integrative Pharmacology of Traditional Chinese Medicine are used to analyze the prescription law of Xiaoke prescription, and the correlation of "core herbs-functionary targets" is excavated, which provided the basis and reference for the screening and development of TCM prescriptions for the prevention and treatment of diabetes.
关键词(KeyWords):
中医方剂大辞典;消渴病;中医传承辅助平台;整合药理学;核心药物;作用靶点
Dictionary of Traditional Chinese Medicine Prescriptions;Xiaoke disease;traditional Chinese medicine inheritance support system;integrative pharmacology;core herbs;functionary targets
基金项目(Foundation): 国家自然科学基金项目(81330086,81673700)
作者(Author):
王波;周荣荣;唐仕欢;
WANG Bo;ZHOU Rong-rong;TANG Shi-huan;Wangjing Hospital, China Academy of Chinese Medical Sciences;School of Basic Medical Sciences, Shanxi University of Traditional Chinese Medicine;Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences;
Email:
DOI: 10.19540/j.cnki.cjcmm.20180710.002
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- 中医方剂大辞典
- 消渴病
- 中医传承辅助平台
- 整合药理学
- 核心药物
- 作用靶点
Dictionary of Traditional Chinese Medicine Prescriptions - Xiaoke disease
- traditional Chinese medicine inheritance support system
- integrative pharmacology
- core herbs
- functionary targets
- 王波
- 周荣荣
- 唐仕欢
WANG Bo- ZHOU Rong-rong
- TANG Shi-huan
- Wangjing Hospital
- China Academy of Chinese Medical Sciences
- School of Basic Medical Sciences
- Shanxi University of Traditional Chinese Medicine
- Institute of Chinese Materia Medica
- China Academy of Chinese Medical Sciences
- 王波
- 周荣荣
- 唐仕欢
WANG Bo- ZHOU Rong-rong
- TANG Shi-huan
- Wangjing Hospital
- China Academy of Chinese Medical Sciences
- School of Basic Medical Sciences
- Shanxi University of Traditional Chinese Medicine
- Institute of Chinese Materia Medica
- China Academy of Chinese Medical Sciences